BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B01LP1|AL426312
(763 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig714 1273 0.0
>3x_Contig714
Length = 3655
Score = 1273 bits (641), Expect = 0.0
Identities = 646/649 (99%)
Strand = Plus / Minus
Query: 1 gatcaagtgagtactaatatcagamaaggattgtcaaagggaacgtatacccacttaatt 60
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 649 gatcaagtgagttctaatatcagaaaaggattgtcaaagggaacgtatacccacttaatt 590
Query: 61 cttcgaatataaacagcgatggctaataccgtgggaggtgtgctttcgggggtcaatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cttcgaatataaacagcgatggctaataccgtgggaggtgtgctttcgggggtcaatcct 530
Query: 121 ttcatatataactctggttcaccaataacgtttttccttattcaagcagcgttaattcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttcatatataactctggttcaccaataacgtttttccttattcaagcagcgttaattcta 470
Query: 181 gtacttacgaatgttttgcatgtgtttatttcgaaacttaggcaaccgaaagttatctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtacttacgaatgttttgcatgtgtttatttcgaaacttaggcaaccgaaagttatctct 410
Query: 241 gaggttattgcaggtatcatactagggcctaccgtgtttggacagatcccaaattatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaggttattgcaggtatcatactagggcctaccgtgtttggacagatcccaaattatctc 350
Query: 301 acaaccattttccctgctggctcagtgactggtttgaaccttgtagctaatttgggaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 acaaccattttccctgctggctcagtgactggtttgaaccttgtagctaatttgggaatc 290
Query: 361 attttgttcatgtttttcttggggatggaagtcgatattagcttcgtgaagagaaatgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 attttgttcatgtttttcttggggatggaagtcgatattagcttcgtgaagagaaatgcc 230
Query: 421 aaggcagcyatctcgattggattggcgacgttaattgtaccattcgggtttgggtgtttg 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaggcagctatctcgattggattggcgacgttaattgtaccattcgggtttgggtgtttg 170
Query: 481 tttgcattacccttatataatgcttatatggacggacatggtattgaattcaaagtcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tttgcattacccttatataatgcttatatggacggacatggtattgaattcaaagtcttt 110
Query: 541 atggtattcattgccgtttctctatcgattacggcttttccagtcttgtgtcgtattctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atggtattcattgccgtttctctatcgattacggcttttccagtcttgtgtcgtattctt 50
Query: 601 accgagttgagattggtgaaagaaagagtaggtatcattgttttgactt 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 accgagttgagattggtgaaagaaagagtaggtatcattgttttgactt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4899
Number of Sequences: 1807
Number of extensions: 4899
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 763
length of database: 10,358,551
effective HSP length: 16
effective length of query: 747
effective length of database: 10,329,639
effective search space: 7716240333
effective search space used: 7716240333
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)